PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_05076-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 266aa    MW: 30382.8 Da    PI: 7.1663
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_05076-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.41.9e-062402633255
                      ..TTS-STCHHHHHHHHHHHHHHH CS
              HLH  32 kapskKlsKaeiLekAveYIksLq 55 
                      ++++ K +Ka++L +++eY+k+Lq
  TRIUR3_05076-P1 240 QGRHHKTNKASMLDETIEYLKQLQ 263
                      78999******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1431131.19E-2820162No hitNo description
PfamPF009561.3E-2271162IPR002164Nucleosome assembly protein (NAP)
Gene3DG3DSA:4.10.280.102.1E-5242265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006334Biological Processnucleosome assembly
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MPISVRFRHA WSLCVRAVMD KLQSLAGQHA DVLESLSPNV RTRVEFLRGI QISPTYVLMS  60
EARNVNAKSP SQHDEIEAKF FEERAALEAK YRKLYEPLYA KTYDIVHCKW SCGAKGVPDF  120
WLTALKTNEV MTEEIQERDE PVLKYLKDIK WSRIDDPKGF KLLTARAAAE SGSKRTCAAE  180
LHNLSDKVVS RFPVVNRFSA ILALFSRLLI ACLLDWGAAA EEQDQREDEG VAEPDTQFQQ  240
GRHHKTNKAS MLDETIEYLK QLQLQV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3733923e-61AK373392.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3029I15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002436481.12e-61hypothetical protein SORBIDRAFT_10g003450
SwissprotQ5VND66e-60NAP1A_ORYSJ; Nucleosome assembly protein 1;1
TrEMBLM8A9P70.0M8A9P7_TRIUA; Nucleosome assembly protein 1-like 1
STRINGMLOC_81305.21e-61(Hordeum vulgare)